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sim4 rpm build for : Mandriva 2010. For other distributions click sim4.

Name : sim4
Version : 20030921 Vendor : Mandriva
Release : 7mdv2010.1 Date : 2010-03-15 14:40:43
Group : Sciences/Biology Source RPM : sim4-20030921-7mdv2010.1.src.rpm
Size : 0.09 MB
Packager : Eric Fernandez < zeb_mandriva_org>
Summary : Program to align cDNA and genomic DNA
Description :
sim4 is a similarity-based tool for aligning an expressed DNA sequence
(EST, cDNA, mRNA) with a genomic sequence for the gene.
It also detects end matches when the two input sequences overlap at one end
(i.e., the start of one sequence overlaps the end of the other)

Reference for Sim4:
L. Florea, G. Hartzell, Z. Zhang, G. Rubin, and W. Miller (1998)
\"A computer program for aligning a cDNA sequence with a genomic DNA sequence.\"
Genome Research 8, 967-974.

RPM found in directory: /mirror/carroll.cac.psu.edu/pub/linux/distributions/mandrakelinux/official/2010.1/i586/media/contrib/release

Content of RPM  Changelog  Provides Requires

Download
ftp.gwdg.de  sim4-20030921-7mdv2010.1.i586.rpm
ftp.gwdg.de  sim4-20030921-7mdv2010.1.i586.rpm
bo.mirror.garr.it  sim4-20030921-7mdv2010.1.i586.rpm
ftp.icm.edu.pl  sim4-20030921-7mdv2010.1.i586.rpm
ftp.pbone.net  sim4-20030921-7mdv2010.1.i586.rpm
ftp.icm.edu.pl  sim4-20030921-7mdv2010.1.i586.rpm
ftp.isu.edu.tw  sim4-20030921-7mdv2010.1.i586.rpm
     Search for other platforms
sim4-20030921-7mdv2010.1.sparc.rpm
sim4-20030921-7mdv2010.1.alpha.rpm
sim4-20030921-7mdv2010.1.ppc.rpm
sim4-20030921-7mdv2010.1.ia64.rpm
sim4-20030921-7mdv2010.1.s390.rpm

Provides :
sim4
sim4(x86-32)

Requires :
libc.so.6(GLIBC_2.4)
rpmlib(CompressedFileNames) <= 3.0.4-1
libc.so.6(GLIBC_2.1)
rpmlib(PayloadIsLzma) <= 4.4.6-1
libc.so.6(GLIBC_2.0)
rtld(GNU_HASH)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libc.so.6(GLIBC_2.7)
libm.so.6(GLIBC_2.0)
libc.so.6
libc.so.6(GLIBC_2.3)
libm.so.6
libc.so.6(GLIBC_2.3.4)


Content of RPM :
/usr/bin/sim4
/usr/share/doc/sim4
/usr/share/doc/sim4/COPYRIGHT
/usr/share/doc/sim4/README.sim4
/usr/share/doc/sim4/VERSION